Information for 11-CTCMTTTRACYCT (Motif 26)

A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G C T A G C T A G C G A T A G C T T C G A C G T A C T G A A C T G C T A G C G T A T A C G
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.773
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.7 +/- 16.3bp
Average Position of motif in Background52.2 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCMTTTRACYCT--
ANTCCTTTGTCTNNNN
 A C G T A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCMTTTRACYCT-----
-NNANTTGACCCCTNNNN
 A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCMTTTRACYCT
TGACCTTTGACCCC
 A C G T A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCMTTTRACYCT
TGACCTTTGACCCC
 A C G T A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCMTTTRACYCT
TGACCTTTGACCCC
 A C G T A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCMTTTRACYCT--
--CNNTTGACCTTTG
 A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCMTTTRACYCT
TGACCTTTGACCTN
 A C G T A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCMTTTRACYCT-----
-TGTCGTGACCCCTTAAT
 A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCMTTTRACYCT-----
-NNNNTTGACCCCTNNNN
 A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCMTTTRACYCT
--CCTTTGTTTT-
 A G T C A C G T A G T C G T A C A G C T A C G T A G C T C T G A C G T A A G T C A G T C A G T C A G C T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T