Information for 5-ACTGCCCTCT (Motif 6)

C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T
Reverse Opposite:
C T G A C T A G C T G A C T A G C A T G A T C G T A G C C G T A A T C G A G C T
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.842
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif262.3
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets58.6 +/- 28.1bp
Average Position of motif in Background49.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTGCCCTCT-
-CTGACCTTTG
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT
--TGACCYCT
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT
--TGACCTYA
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACTGCCCTCT
-CTGCCCGCA
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACTGCCCTCT--------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT-------
--TGACCTTTGCCCTAN
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT------
--TGACCTTTGCCCTA
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACTGCCCTCT
-ATGCCCACC
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACTGCCCTCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTGCCCTCT------
--TGACCTTTGCCCCA
 C T G A A T G C C G A T A T C G T A G C G T A C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A