Information for 8-CAAGTTTCAT (Motif 15)

A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T
Reverse Opposite:
T G C A G C A T A C T G G T C A C T G A G T C A G A T C G C A T C A G T T C A G
p-value:1e-10
log p-value:-2.351e+01
Information Content per bp:1.666
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif803.1
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets43.9 +/- 27.4bp
Average Position of motif in Background50.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CAAGTTTCAT
----TTTAAT
 A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAAGTTTCAT-
-TGGTTTCAGT
 A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAGTTTCAT
CAAGCTT---
 A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAAGTTTCAT
GKVTCADRTTWC--
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTTTCAT
GKMTCADRTTWC--
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTTCAT----
TNGAATTTCATTNAN
 A C G T A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTTCAT------
NTNAATTTTATTGNATT
 A C G T A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAGTTTCAT------
NGANTTTTATGGCTCN
 A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAGTTTCAT------
NNANTTTTATTGGNNN
 A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAAGTTTCAT---
---NTTTTATTGG
 A G T C G T C A C G T A C T A G C A G T G A C T C A G T T G A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G