Information for 19-TGACCTCACVGGV (Motif 23)

A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A T C G A T C G A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 22.6bp
Average Position of motif in Background64.1 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGACCTCACVGGV
TGACCTYA-----
 A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGACCTCACVGGV
TGACCYCT-----
 A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGACCTCACVGGV
TGACCT-------
 A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCACVGGV
GTGACGTCACCG--
 A C G T A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCACVGGV
ATGACGTCAYYN--
 A C G T A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCACVGGV
RTGACGTCAYCN--
 A C G T A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCACVGGV
GTGACCTT------
 A C G T A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGACCTCACVGGV
ACGATGACGTCATCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGACCTCACVGGV
TGACGTCA-----
 A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACCTCACVGGV
ATGACGTCATCN--
 A C G T A C G T A C T G C G T A A T G C A T G C A C G T A G T C G T C A A G T C T A G C C T A G A C T G T A G C
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T