Information for 10-GRCGTCACGT (Motif 17)

A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T
Reverse Opposite:
T G C A T A G C A C T G C G A T A T C G T C G A A T G C C T A G A G T C T A G C
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.515
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif20.99%
Number of Background Sequences with motif5025.1
Percentage of Background Sequences with motif13.61%
Average Position of motif in Targets55.4 +/- 26.9bp
Average Position of motif in Background50.5 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GRCGTCACGT
TGACGTCA---
 A C G T A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GRCGTCACGT--
CCGGTCACGTGA
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GRCGTCACGT--
--GGTCACGTGC
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T A C G T A C G T
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GRCGTCACGT
CGGTGACGTCAC--
 A C G T A C G T A C G T A C G T A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GRCGTCACGT--
--GGTCACGTGA
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T A C G T A C G T
A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GRCGTCACGT---
---GTCACGTGAC
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GRCGTCACGT
--AGTCACGC
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GRCGTCACGT---
---GTCACGTGAT
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GRCGTCACGT---
---GTCACGTGAN
 A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GRCGTCACGT
TGACGTCATC-
 A C G T A T C G T C A G G A T C T A C G A G C T T A G C G C T A T G A C A T C G A C G T
G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C A C G T