Information for 7-MGSTTTACGA (Motif 12)

G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A
Reverse Opposite:
C G A T A G T C A C T G A C G T C G T A C G T A G T C A A T G C A T G C A C G T
p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.897
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 23.2bp
Average Position of motif in Background12.5 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:MGSTTTACGA--
-NTTTTACGACT
 G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Hoxa11/MA0911.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:MGSTTTACGA--
ANTTTTACGACC
 G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-MGSTTTACGA-----
ANNTTTTACGACNTNN
 A C G T G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:MGSTTTACGA--
-NTTTTACGACC
 G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T
A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MGSTTTACGA--
-NTTTTACGACC
 G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MGSTTTACGA-
-NTTTTACGAC
 G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-MGSTTTACGA-----
NNGTTTTACGACTTTA
 A C G T G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--MGSTTTACGA-----
GNNNTTTTACGACCTNA
 A C G T A C G T G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:MGSTTTACGA--
-NTTTTACGAGN
 G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--MGSTTTACGA-----
NNNATTTTACGACNNTN
 A C G T A C G T G T C A A T C G A T C G A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G