p-value: | 1e-9 |
log p-value: | -2.262e+01 |
Information Content per bp: | 1.665 |
Number of Target Sequences with motif | 39.0 |
Percentage of Target Sequences with motif | 4.17% |
Number of Background Sequences with motif | 561.8 |
Percentage of Background Sequences with motif | 1.25% |
Average Position of motif in Targets | 52.5 +/- 28.5bp |
Average Position of motif in Background | 48.5 +/- 29.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nr2e3/MA0164.1/Jaspar
Match Rank: | 1 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAAGCTTTGC CAAGCTT--- |
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Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAAGCTTTGC AAATCACTGC |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAAGCTTTGC-- NNTCCTGCTGTGNNN |
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PB0161.1_Rxra_2/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CAAGCTTTGC-- NNNNCAACCTTCGNGA |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CAAGCTTTGC--- ---CCTTTGATGT |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAAGCTTTGC-- TCNCCTGCTGNGNNN |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAAGCTTTGC--- NGTCACGCTTGGCTGC |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CAAGCTTTGC--- ---CCWTTGTYYB |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAAGCTTTGC-- TNTCCTGCTGTGNNG |
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Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CAAGCTTTGC---- ----ATTTGCATAT |
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