Information for 5-ATCTGGCACT (Motif 9)

T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
Reverse Opposite:
C T G A A T C G A G C T A T C G A G T C G T A C C G T A C T A G C T G A A C G T
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.841
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.7 +/- 28.1bp
Average Position of motif in Background47.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATCTGGCACT
GGTCTGGCAT-
 A C G T T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGGCACT-
TGTCTGDCACCT
 A C G T T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATCTGGCACT
-NTTGGCANN
 T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCTGGCACT-
CTGTCTGTCACCT
 A C G T A C G T T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATCTGGCACT
-CTTGGCAA-
 T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATCTGGCACT
--TTGGCA--
 T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCTGGCACT
NNTTGGCANN
 T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCTGGCACT
ARNTGACA--
 T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ATCTGGCACT
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCTGGCACT
AACATCTGGA---
 A C G T A C G T A C G T T G C A A G C T A G T C A C G T A C T G C T A G A T G C C T G A A T G C A G C T
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T