Information for 3-AAGTAAACAACCA (Motif 3)

C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
Reverse Opposite:
C A G T C A T G A C T G A C G T A C G T A C T G A G C T A C G T A C G T G T C A A G T C A G C T A C G T
p-value:1e-17
log p-value:-4.033e+01
Information Content per bp:1.795
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.1 +/- 22.5bp
Average Position of motif in Background29.9 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAACAACCA
AAAGTAAACA----
 A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAACAACCA
AAAGTAAACA----
 A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AAGTAAACAACCA
AAGTAAACAAA--
 C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAGTAAACAACCA-
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAGTAAACAACCA-
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAGTAAACAACCA-
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AAGTAAACAACCA
CAAAGTAAACANNNN
 A C G T A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AAGTAAACAACCA
AAATAAACA----
 C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-AAGTAAACAACCA
TAAGTAAACAAA--
 A C G T C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AAGTAAACAACCA
--GTAAACAA---
 C G T A C T G A A C T G A C G T G T C A C G T A C T G A A G T C G T C A T G C A T G A C G A T C G T C A
A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T