p-value: | 1e-11 |
log p-value: | -2.566e+01 |
Information Content per bp: | 1.838 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 0.96% |
Number of Background Sequences with motif | 12.5 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 28.6 +/- 14.4bp |
Average Position of motif in Background | 54.0 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCAAGGCWACCA TTGCCATGGCAACN- |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.78 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCAAGGCWACCA TTGCCATGGCAACC- |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 3 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCAAGGCWACCA GTTGCCATGGCAACCG |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 4 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCAAGGCWACCA GTTGCCATGGCAACM- |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 5 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCAAGGCWACCA GTTGCCATGGCAAC-- |
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RFX4/MA0799.1/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCCAAGGCWACCA CGTTGCCATGGCAACG- |
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RFX3/MA0798.1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCCAAGGCWACCA CGTTGCCATGGCAACG- |
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RFX2/MA0600.2/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCCAAGGCWACCA CGTTGCCATGGCAACG- |
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RFX5/MA0510.2/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCCAAGGCWACCA NGTTGCCATGGCAACG- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCCAAGGCWACCA --CAAGGHCANV- |
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