Information for 6-GTGTCATCCT (Motif 4)

C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C G T A C T G T G C A G T A C C G T A G A T C
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif103.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets57.3 +/- 21.8bp
Average Position of motif in Background47.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GTGTCATCCT---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTGTCATCCT
NTGTCAN---
 C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGTCATCCT
-TGTCANYT-
 C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCATCCT
VBTGWCAGCB-
 A C G T C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCATCCT-
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGTCATCCT
YTGWCADY--
 C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCATCCT
CCTGTCAA---
 A C G T C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTGTCATCCT
--GTCATN--
 C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTCATCCT
ACGTCATC--
 C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGTCATCCT
ATGCCAACC-
 C T A G A C G T A C T G A C G T A G T C G T C A G C A T A G T C A G T C A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T