Information for 5-TTTCAGAACT (Motif 3)

A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T
Reverse Opposite:
C G T A C T A G A C G T C G A T G T A C C G A T A T C G C G T A C T G A T G C A
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif118.8
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets45.6 +/- 32.1bp
Average Position of motif in Background50.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTCAGAACT
TTTCACACCT
 A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGAACT----
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTCAGAACT-
CTTCACACCTA
 A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGAACT-
NTTTTCACACCTT
 A C G T A C G T A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTCAGAACT-
-TTCACACCTT
 A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTCAGAACT
--TCACACCT
 A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGAACT
TGGTTTCAGT---
 A C G T A C G T A C G T A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTCAGAACT-
TTTCACACCTN
 A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTCAGAACT
--TCACACCT
 A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGAACT-----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A G C T A C G T A T G C C G T A C A T G C G T A T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A