Information for 6-AATAATGGTC (Motif 24)

C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.334e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 16.3bp
Average Position of motif in Background81.2 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATAATGGTC-
-NTAATKGTTT
 C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATAATGGTC
VRAACAATGG--
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AATAATGGTC
GAACAATGG--
 A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATAATGGTC
-NTAATTGN-
 C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AATAATGGTC
AATAATT---
 C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AATAATGGTC
RAACAATGGN-
 A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATAATGGTC
AACAAAGG--
 C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AATAATGGTC--
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATAATGGTC
GKTAATGR--
 C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AATAATGGTC
GAACAATGGN-
 A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A G T C
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T