Information for 13-CAAATAGCTATTT (Motif 23)

A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G A T C G T A C T A G A T G C A C G T G C T A C G A T A C G T A C G T T A C G
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.816
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.5 +/- 20.0bp
Average Position of motif in Background52.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSC/MA0665.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAATAGCTATTT
--AACAGCTGTT-
 A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAAATAGCTATTT--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAAATAGCTATTT-----
------KCTATTTTTRGH
 A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAAATAGCTATTT
KCCAAAAATAGC-----
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CAAATAGCTATTT----
-------CTATTTTTGG
 A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CAAATAGCTATTT
GAAGACCAATTAGCGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAATAGCTATTT
ACTAATTAGC-----
 A C G T A C G T A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAAATAGCTATTT-------
-----TTCTATTTTTAGNNN
 A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MYF6/MA0667.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAAATAGCTATTT
--AACAGCTGTT-
 A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAAATAGCTATTT
TAAACTAATTAGCTTTG-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G A T C G T A A T C G A G T C C G A T G C T A A C G T A C G T A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G A C G T