Information for 8-TAGCRATAAWTCC (Motif 15)

A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A C G T A A C G T A C G T C G T A C G A T A G C T A C T G A G T C A C G T C G T A
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 9.1bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAGCRATAAWTCC-
-GGCCATAAATCAC
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGCRATAAWTCC
-GGCCATAAATCA
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGCRATAAWTCC
-GGCCATAAATCA
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGCRATAAWTCC----
TCGCGATAATTACCGAC
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAGCRATAAWTCC
--GCCATAAATCA
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TAGCRATAAWTCC
----AATAATT--
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAGCRATAAWTCC
--GCAATAAAA--
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGCRATAAWTCC----
GCGCTATAATTACCGAC
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAGCRATAAWTCC
AAGCCATAAAA--
 A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAGCRATAAWTCC--
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G A G T C C T G A C G T A A C G T C G T A C G T A C G A T A C G T A G T C A G T C A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T