Information for 21-TTGGABHATCAGCTCD (Motif 39)

C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
Reverse Opposite:
G A C T A T C G C G T A A C T G A G T C A C G T A T C G C G T A A C G T C G T A T A C G A C G T A T G C A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.461e+01
Information Content per bp:1.788
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 21.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP4/MA0691.1/Jaspar

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TTGGABHATCAGCTCD-
-------ATCAGCTGTT
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TTGGABHATCAGCTCD
------NAHCAGCTGD
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TTGGABHATCAGCTCD
------NAACAGCTGG
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TTGGABHATCAGCTCD
------BAACAGCTGT
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTGGABHATCAGCTCD
-------AACAGCTG-
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTGGABHATCAGCTCD
------CAGCAGCTGN
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MSC/MA0665.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TTGGABHATCAGCTCD-
-------AACAGCTGTT
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGGABHATCAGCTCD
ADGGYAGYAGCATCT--
 A C G T C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTGGABHATCAGCTCD-
-----NNAGCAGCTGCT
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTGGABHATCAGCTCD
-------ANCAGCTG-
 C G A T A C G T A C T G T A C G C G T A A G T C G A C T G T C A C G A T A T G C G T C A A C T G A G T C A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T