Information for 11-GAATCTGCTAGTC (Motif 34)

A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T C G T A A T C G A G T C C G T A A C T G C T G A A C G T A C G T A T G C
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 8.9bp
Average Position of motif in Background65.7 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAATCTGCTAGTC
ACCATCTGTT----
 A C G T A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAATCTGCTAGTC
GAANNTTCTAGAA
 A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------GAATCTGCTAGTC
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAATCTGCTAGTC
GAANGTTCTAGAA
 A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAATCTGCTAGTC
GCCATCTGTT----
 A C G T A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAATCTGCTAGTC
RCCATMTGTT----
 A C G T A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAATCTGCTAGTC
TAGAANVTTCTAGAA
 A C G T A C G T A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAATCTGCTAGTC
-CAGCTGNT----
 A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAATCTGCTAGTC
-AAGGTGTKAA--
 A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAATCTGCTAGTC
GAACGTTCTAGAA
 A T C G G T C A C G T A A G C T A G T C A C G T A C T G A T G C A C G T C G T A A C T G A C G T A G T C
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A