Information for 13-RATKTCTGAAGRRYMG (Motif 18)

C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
Reverse Opposite:
A G T C C A T G C T G A A G T C A G C T A G T C A C G T A C G T A G T C C G T A A C T G C G T A G T C A C T G A A C G T A G T C
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 20.8bp
Average Position of motif in Background40.6 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RATKTCTGAAGRRYMG
-ANTTCTCAGGAANNN
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RATKTCTGAAGRRYMG
-ANTTCTNNAGAA---
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RATKTCTGAAGRRYMG
TAGGTGTGAAG-----
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:RATKTCTGAAGRRYMG
------NGAAGC----
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RATKTCTGAAGRRYMG
AAGGTGTGAA------
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---RATKTCTGAAGRRYMG
NNTNNTGTCTGGNNTNG--
 A C G T A C G T A C G T C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RATKTCTGAAGRRYMG
---TTCTNMGGAA---
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:RATKTCTGAAGRRYMG
AAGGTGTGAAAAT---
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:RATKTCTGAAGRRYMG
-AGGTGTGAAA-----
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:RATKTCTGAAGRRYMG
AATTAGTG--------
 C T A G C G T A A G C T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T G A C T A G G A C T G T A C A C T G
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T