Information for 2-NNNTGTTTACWBA (Motif 2)

A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
Reverse Opposite:
G C A T T C A G C G T A T C A G G A C T T G C A G T C A G C T A A G T C G T C A C G T A G C A T T C G A
p-value:1e-109
log p-value:-2.524e+02
Information Content per bp:1.531
Number of Target Sequences with motif258.0
Percentage of Target Sequences with motif33.90%
Number of Background Sequences with motif2958.5
Percentage of Background Sequences with motif6.58%
Average Position of motif in Targets52.3 +/- 25.0bp
Average Position of motif in Background50.1 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.94
Offset:3
Orientation:forward strand
Alignment:NNNTGTTTACWBA
---TRTTTACTTW
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:NNNTGTTTACWBA
---TGTTTACTTT
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:NNNTGTTTACWBA
---TGTTTACTTT
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-NNNTGTTTACWBA-
TCCATGTTTACTTTG
 A C G T A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:NNNTGTTTACWBA
-TTTGTTTACTTA
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:6
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:NNNTGTTTACWBA
---TGTTTAC---
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.92
Offset:3
Orientation:forward strand
Alignment:NNNTGTTTACWBA--
---TGTTTACTTAGG
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:NNNTGTTTACWBA--
BSNTGTTTACWYWGN
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.91
Offset:3
Orientation:forward strand
Alignment:NNNTGTTTACWBA
---TGTTTATTT-
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:NNNTGTTTACWBA
---TGTTTAC---
 A G C T C G T A G C A T A C G T T C A G C G A T A C G T A C G T C T G A A G T C G C A T A G T C C G T A
A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T