Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-147 | -3.390e+02 | 0.0000 | 333.0 | 45.80% | 1166.9 | 9.07% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-129 | -2.971e+02 | 0.0000 | 357.0 | 49.11% | 1579.0 | 12.27% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-128 | -2.967e+02 | 0.0000 | 329.0 | 45.25% | 1312.5 | 10.20% | motif file (matrix) |
svg |
4 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-98 | -2.270e+02 | 0.0000 | 81.0 | 11.14% | 36.4 | 0.28% | motif file (matrix) |
svg |
5 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-96 | -2.230e+02 | 0.0000 | 240.0 | 33.01% | 869.8 | 6.76% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-92 | -2.130e+02 | 0.0000 | 248.0 | 34.11% | 981.9 | 7.63% | motif file (matrix) |
svg |
7 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-90 | -2.078e+02 | 0.0000 | 95.0 | 13.07% | 80.4 | 0.62% | motif file (matrix) |
svg |
8 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-86 | -1.984e+02 | 0.0000 | 98.0 | 13.48% | 98.4 | 0.76% | motif file (matrix) |
svg |
9 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-83 | -1.922e+02 | 0.0000 | 101.0 | 13.89% | 115.1 | 0.89% | motif file (matrix) |
svg |
10 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-68 | -1.568e+02 | 0.0000 | 105.0 | 14.44% | 186.8 | 1.45% | motif file (matrix) |
svg |
11 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-67 | -1.557e+02 | 0.0000 | 262.0 | 36.04% | 1449.1 | 11.26% | motif file (matrix) |
svg |
12 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-61 | -1.412e+02 | 0.0000 | 129.0 | 17.74% | 361.7 | 2.81% | motif file (matrix) |
svg |
13 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-55 | -1.277e+02 | 0.0000 | 222.0 | 30.54% | 1230.6 | 9.56% | motif file (matrix) |
svg |
14 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-54 | -1.247e+02 | 0.0000 | 220.0 | 30.26% | 1231.8 | 9.57% | motif file (matrix) |
svg |
15 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-53 | -1.230e+02 | 0.0000 | 206.0 | 28.34% | 1100.2 | 8.55% | motif file (matrix) |
svg |
16 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-44 | -1.036e+02 | 0.0000 | 179.0 | 24.62% | 966.4 | 7.51% | motif file (matrix) |
svg |
17 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-40 | -9.373e+01 | 0.0000 | 122.0 | 16.78% | 503.8 | 3.92% | motif file (matrix) |
svg |
18 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-32 | -7.412e+01 | 0.0000 | 127.0 | 17.47% | 666.0 | 5.18% | motif file (matrix) |
svg |
19 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-28 | -6.594e+01 | 0.0000 | 206.0 | 28.34% | 1628.9 | 12.66% | motif file (matrix) |
svg |
20 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.589e+01 | 0.0000 | 233.0 | 32.05% | 2289.5 | 17.79% | motif file (matrix) |
svg |
21 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-17 | -4.072e+01 | 0.0000 | 140.0 | 19.26% | 1135.1 | 8.82% | motif file (matrix) |
svg |
22 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-14 | -3.273e+01 | 0.0000 | 143.0 | 19.67% | 1292.4 | 10.04% | motif file (matrix) |
svg |
23 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-14 | -3.262e+01 | 0.0000 | 136.0 | 18.71% | 1204.0 | 9.36% | motif file (matrix) |
svg |
24 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-12 | -2.897e+01 | 0.0000 | 98.0 | 13.48% | 783.9 | 6.09% | motif file (matrix) |
svg |
25 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-11 | -2.712e+01 | 0.0000 | 91.0 | 12.52% | 724.9 | 5.63% | motif file (matrix) |
svg |
26 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-10 | -2.474e+01 | 0.0000 | 21.0 | 2.89% | 55.7 | 0.43% | motif file (matrix) |
svg |
27 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.265e+01 | 0.0000 | 66.0 | 9.08% | 489.8 | 3.81% | motif file (matrix) |
svg |
28 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.174e+01 | 0.0000 | 60.0 | 8.25% | 432.4 | 3.36% | motif file (matrix) |
svg |
29 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.756e+01 | 0.0000 | 15.0 | 2.06% | 41.2 | 0.32% | motif file (matrix) |
svg |
30 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.696e+01 | 0.0000 | 91.0 | 12.52% | 889.9 | 6.92% | motif file (matrix) |
svg |
31 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.427e+01 | 0.0000 | 20.0 | 2.75% | 93.0 | 0.72% | motif file (matrix) |
svg |
32 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-5 | -1.265e+01 | 0.0000 | 110.0 | 15.13% | 1256.2 | 9.76% | motif file (matrix) |
svg |
33 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-4 | -1.108e+01 | 0.0002 | 63.0 | 8.67% | 635.9 | 4.94% | motif file (matrix) |
svg |
34 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-4 | -1.061e+01 | 0.0003 | 88.0 | 12.10% | 995.1 | 7.73% | motif file (matrix) |
svg |
35 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-4 | -1.045e+01 | 0.0003 | 79.0 | 10.87% | 871.3 | 6.77% | motif file (matrix) |
svg |
36 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-4 | -1.003e+01 | 0.0004 | 29.0 | 3.99% | 223.2 | 1.73% | motif file (matrix) |
svg |
37 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-4 | -9.797e+00 | 0.0005 | 118.0 | 16.23% | 1464.2 | 11.38% | motif file (matrix) |
svg |
38 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -9.523e+00 | 0.0007 | 57.0 | 7.84% | 588.6 | 4.57% | motif file (matrix) |
svg |
39 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.270e+00 | 0.0009 | 15.0 | 2.06% | 82.8 | 0.64% | motif file (matrix) |
svg |
40 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -8.684e+00 | 0.0015 | 119.0 | 16.37% | 1520.6 | 11.82% | motif file (matrix) |
svg |
41 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.643e+00 | 0.0016 | 17.0 | 2.34% | 107.9 | 0.84% | motif file (matrix) |
svg |
42 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -8.599e+00 | 0.0016 | 73.0 | 10.04% | 836.5 | 6.50% | motif file (matrix) |
svg |
43 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.484e+00 | 0.0017 | 54.0 | 7.43% | 571.8 | 4.44% | motif file (matrix) |
svg |
44 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -8.361e+00 | 0.0019 | 13.0 | 1.79% | 70.0 | 0.54% | motif file (matrix) |
svg |
45 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.949e+00 | 0.0029 | 41.0 | 5.64% | 407.5 | 3.17% | motif file (matrix) |
svg |
46 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -6.719e+00 | 0.0096 | 4.0 | 0.55% | 9.0 | 0.07% | motif file (matrix) |
svg |
47 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.334e+00 | 0.0137 | 32.0 | 4.40% | 321.9 | 2.50% | motif file (matrix) |
svg |
48 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -6.287e+00 | 0.0141 | 32.0 | 4.40% | 322.3 | 2.50% | motif file (matrix) |
svg |
49 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.130e+00 | 0.0162 | 23.0 | 3.16% | 208.7 | 1.62% | motif file (matrix) |
svg |
50 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -6.036e+00 | 0.0174 | 15.0 | 2.06% | 113.1 | 0.88% | motif file (matrix) |
svg |
51 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -6.017e+00 | 0.0174 | 30.0 | 4.13% | 301.1 | 2.34% | motif file (matrix) |
svg |
52 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -6.009e+00 | 0.0174 | 13.0 | 1.79% | 91.0 | 0.71% | motif file (matrix) |
svg |
53 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.629e+00 | 0.0247 | 88.0 | 12.10% | 1167.0 | 9.07% | motif file (matrix) |
svg |
54 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.488e+00 | 0.0279 | 15.0 | 2.06% | 120.7 | 0.94% | motif file (matrix) |
svg |
55 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.154e+00 | 0.0382 | 13.0 | 1.79% | 101.9 | 0.79% | motif file (matrix) |
svg |
56 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.076e+00 | 0.0406 | 57.0 | 7.84% | 714.1 | 5.55% | motif file (matrix) |
svg |
57 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.766e+00 | 0.0544 | 36.0 | 4.95% | 415.4 | 3.23% | motif file (matrix) |
svg |
58 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.665e+00 | 0.0591 | 53.0 | 7.29% | 669.2 | 5.20% | motif file (matrix) |
svg |
59 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | -4.658e+00 | 0.0591 | 58.0 | 7.98% | 745.4 | 5.79% | motif file (matrix) |
svg |
60 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.641e+00 | 0.0591 | 42.0 | 5.78% | 506.3 | 3.94% | motif file (matrix) |
svg |
61 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -4.616e+00 | 0.0591 | 17.0 | 2.34% | 158.3 | 1.23% | motif file (matrix) |
svg |