Information for 17-CAAAGAACAAYAW (Motif 16)

T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T
Reverse Opposite:
C G T A G C A T C T A G A G C T A G C T A T C G G A C T C A G T G A T C G A C T A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.389e+01
Information Content per bp:1.597
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 25.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CAAAGAACAAYAW
AACAAACAACAAGAG
 A C G T A C G T T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAAAGAACAAYAW--
CAAACAACAACACCT
 T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAAAGAACAAYAW---
TTTAGAACAATAAAAT
 T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAAAGAACAAYAW---
TTAAGAACAATAAATT
 T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAAAGAACAAYAW---
TCACGGAACAATAGGTG
 A C G T T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAAAGAACAAYAW----
TNNAGAACAATANATNN
 T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAACAAYAW---
NNNNNGAACAATTGANN
 A C G T T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAACAAYAW
NTTNAGAACAATTA
 A C G T T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAAAGAACAAYAW-------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAAGAACAAYAW----
TAGTGAACAATAGATTT
 T G A C T C G A T G C A C T G A C T A G G T C A C G T A T A G C T C G A T C G A G A T C C G T A G C A T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T