Information for 14-CYRTTSCCAGGAA (Motif 14)

A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A C G T A C T G A C T G A T G C C G T A C G T A A G T C C T G A A C T G
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.0 +/- 24.7bp
Average Position of motif in Background55.9 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CYRTTSCCAGGAA-
--NTTTCCNGGAAA
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CYRTTSCCAGGAA-
NNNCTTTCCAGGAAA
 A C G T A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CYRTTSCCAGGAA--
-NNCTTCCNGGAAGN
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CYRTTSCCAGGAA----
---TTTCCAGGAAATGG
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CYRTTSCCAGGAA-
---TTTCCAGGAAA
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CYRTTSCCAGGAA---
-ANTTCTCAGGAANNN
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T A C G T A C G T
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CYRTTSCCAGGAA--
---TTCTNNAGAANT
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CYRTTSCCAGGAA--
-NATTTCCNGGAAAT
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A A C G T A C G T
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CYRTTSCCAGGAA
CTGTTGCTAGGS-
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CYRTTSCCAGGAA
---CTTCCNGGAA
 A G T C A G C T C T A G A C G T A C G T A T C G G T A C A G T C C G T A C T A G C T A G C G T A C G T A
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A