Information for 13-ATTGATATGTACA (Motif 13)

T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T G T C A A G T C G T C A A C G T C G T A A C G T G T A C G T C A C G T A A C G T
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.823
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.6 +/- 22.5bp
Average Position of motif in Background47.5 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATTGATATGTACA--
----ATATTTACATA
 T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATTGATATGTACA---
--TTATTAGTACATAN
 T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTGATATGTACA-
CATTGTTATGCAAAT
 A C G T T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATTGATATGTACA-
CTTTGTTATGCAAAT
 A C G T T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTGATATGTACA--
-NNTATANATATACN
 T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATTGATATGTACA-
YATGCATATRCATRT
 A C G T T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTGATATGTACA
ATTGATTYND---
 T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGATATGTACA
NNNNNATTGATGNGTGN-
 A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTGATATGTACA
TTTAAT-------
 T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTGATATGTACA---
ATGGGATATATCCGCCT
 A C G T T C G A C G A T A C G T C A T G C G T A A C G T G T C A A C G T C T A G A C G T C G T A A G T C C G T A A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T