Information for 12-AHAAAGAAAGCCA (Motif 12)

C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
Reverse Opposite:
A C G T A C T G A T C G A G T C A C G T A C G T A C G T T A G C C G A T G A C T A C G T C G T A C G A T
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.794
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.1 +/- 19.0bp
Average Position of motif in Background50.7 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AHAAAGAAAGCCA
-AAAACAAAGG--
 C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AHAAAGAAAGCCA
GAAAGTGAAAGT--
 A C G T C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AHAAAGAAAGCCA
BAGTCATANTGAAAG---
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AHAAAGAAAGCCA
AGAAAGTGAAAGTGA
 A C G T A C G T C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AHAAAGAAAGCCA---
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AHAAAGAAAGCCA-
-----AAAAGTCAA
 C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AHAAAGAAAGCCA
----ACAAAG---
 C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AHAAAGAAAGCCA
GGAAANTGAAACTNA
 A C G T A C G T C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AHAAAGAAAGCCA-
AAACAGACAAAGGAAT
 A C G T A C G T C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AHAAAGAAAGCCA
-GGAACAAAGR--
 C G T A G C A T G T C A C G T A C G T A A T C G C G T A C G T A C G T A A C T G A T G C G T A C C G T A
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T