Information for 23-SCWKCYTYGGGGSWRY (Motif 27)

A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
Reverse Opposite:
C T A G A G C T C G A T A T C G A G T C A G T C A G T C G T A C C T G A C T G A C T A G A C T G G T A C C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 25.2bp
Average Position of motif in Background49.5 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
--TGCCCNGGGGCA--
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
--TGCCCTNGGGCA--
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
--TGCCCTNGGGCA--
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
-NTGCCCTAGGGCAA-
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
-CTTCGTGGGGGGTC-
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
GCTTCGTGGGGGGTCT
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SCWKCYTYGGGGSWRY
---GCCTCAGGGCAT-
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:SCWKCYTYGGGGSWRY
---SCCTSAGGSCAW-
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:SCWKCYTYGGGGSWRY-----
----GCTGGGGGGTACCCCTT
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SCWKCYTYGGGGSWRY
ATTCCCTGAGGGGAA-
 A T G C A G T C C G A T A C T G A G T C A G T C A G C T A G C T A C T G A C T G A C T G A C T G A T G C C G T A C T G A A G T C
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T