Information for 14-TCCHCAAGTCTGG (Motif 23)

A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
Reverse Opposite:
G T A C A G T C C G T A A C T G C T G A A T G C A C G T C G A T A T C G C A G T A C T G A C T G G T C A
p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.777
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.7 +/- 18.3bp
Average Position of motif in Background36.9 +/- 41.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCCHCAAGTCTGG
-----TWGTCTGV
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCCHCAAGTCTGG
---VBSYGTCTGG
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCCHCAAGTCTGG
-----CTGTCTGG
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCCHCAAGTCTGG---
------GGTCTGGCAT
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCCHCAAGTCTGG-----
-NNTNNTGTCTGGNNTNG
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCHCAAGTCTGG
TCCCCA-------
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCCHCAAGTCTGG
ATCCAC--------
 A C G T A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCCHCAAGTCTGG
TCACCTCTGGGCAG-
 A C G T A C G T A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TCCHCAAGTCTGG-----
------TGTCTGDCACCT
 A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TCCHCAAGTCTGG
TGCCCCCGGGCA--
 A C G T A C G T A G T C A G T C G T A C A T G C G C T A C G T A A T C G A G C T G T A C A C G T C T A G A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T