p-value: | 1e-11 |
log p-value: | -2.551e+01 |
Information Content per bp: | 1.878 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 59.6 +/- 15.2bp |
Average Position of motif in Background | 63.0 +/- 21.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0011.1_Alx1_2/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----MRTAAWWAAGGTG NNNAATTAATTAANGNG |
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PH0072.1_Hoxc8/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----MRTAAWWAAGGTG TTGGGGTAATTAACGT- |
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PH0173.1_Uncx/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----MRTAAWWAAGGTG CATAATTAATTAACGCG |
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PH0071.1_Hoxc6/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----MRTAAWWAAGGTG NNTNATTAATTAATTTG |
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PB0176.1_Sox5_2/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---MRTAAWWAAGGTG TATCATAATTAAGGA- |
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PH0069.1_Hoxc4/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----MRTAAWWAAGGTG NNTNNTTAATTAATNCG |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | MRTAAWWAAGGTG--- --------AGGTGTCA |
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PH0054.1_Hoxa7_1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----MRTAAWWAAGGTG GNNNATTAATTAANNCG |
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PH0051.1_Hoxa4/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----MRTAAWWAAGGTG GATTATTAATTAACTTG |
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LMX1B/MA0703.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | MRTAAWWAAGGTG -TTAATTAA---- |
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