Information for 5-TTTATTGCATTTC (Motif 7)

A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
Reverse Opposite:
A C T G C T G A T C G A T C G A C G A T A C T G G T A C C G T A C G T A A C G T G T C A T C G A C G T A
p-value:1e-12
log p-value:-2.828e+01
Information Content per bp:1.794
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif94.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets42.9 +/- 25.4bp
Average Position of motif in Background46.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTGCATTTC
TTTTATGGCTN---
 A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTGCATTTC
TTTTATTGC-----
 A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTATTGCATTTC
NAATTTTATTACCNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTTATTGCATTTC
NTNAATTTTATTGNATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCATTTC
NTTTTATGAC-----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCATTTC
NTTTTATTACN----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTATTGCATTTC-
NTTATTGATTTTTT
 A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTGCATTTC
NGANTTTTATGGCTCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCATTTC
TTTTTATTGG-----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCATTTC
TTTTTATTGC-----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T G C A T A C T G G T A C G C T A A C G T A G C T A G C T G T A C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T