Information for 8-YTCCWGGMTGSCGGCT (Motif 6)

A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
Reverse Opposite:
C G T A A C T G G T A C G T A C C A T G A T C G A T G C G C T A A C T G A G T C A G T C C G A T C T A G C A T G C T G A C T A G
p-value:1e-13
log p-value:-3.193e+01
Information Content per bp:1.691
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.7 +/- 23.4bp
Average Position of motif in Background43.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:YTCCWGGMTGSCGGCT-
---CTGGCAGNCTGCCA
 A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----YTCCWGGMTGSCGGCT
NNNCTTTCCAGGAAA------
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTCCWGGMTGSCGGCT
TTCCNGGAAG------
 A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---YTCCWGGMTGSCGGCT
NNCTTCCNGGAAGN-----
 A C G T A C G T A C G T A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YTCCWGGMTGSCGGCT--
--CTTGGCANNNTGCCAA
 A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YTCCWGGMTGSCGGCT
TTTCCNGGAAAN-----
 A C G T A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YTCCWGGMTGSCGGCT
---CAAGATGGCGGC-
 A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-YTCCWGGMTGSCGGCT
TTTCCAGGAAA------
 A C G T A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:YTCCWGGMTGSCGGCT
-ANCAGGATGT-----
 A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----YTCCWGGMTGSCGGCT
NGCTTTCTAGGAAN------
 A C G T A C G T A C G T A C G T A G C T G A C T G T A C A G T C C G T A A C T G C T A G G T A C C G A T A T C G A T G C G T A C A C T G A C T G G T A C G C A T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T