Information for 23-GGAAAGACCG (Motif 35)

C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
Reverse Opposite:
A G T C A T C G A C T G A C G T G T A C A C G T A G C T A C G T T G A C A G T C
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.715
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif364.3
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets53.3 +/- 29.5bp
Average Position of motif in Background51.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGAAAGACCG
GGAAANCCCC
 C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAAAGACCG
GGAAATTCCC
 C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAAAGACCG
GGAAATCCCC
 C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAAAGACCG---
-CAACGTCCGCGG
 C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G A C G T A C G T A C G T
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGAAAGACCG
GGAAATTCCC
 C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGACCG-
GGGAAATCCCCN
 A C G T C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGACCG----
GGCAAAAGTCCAATAA
 A C G T A C G T C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGACCG
NNTGGAAANN---
 A C G T A C G T A C G T C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGACCG
AATGGAAAAT---
 A C G T A C G T A C G T C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGAAAGACCG---
---GAGSCCGAGC
 C T A G A C T G C G T A T C G A G T C A A C T G T G C A A G T C A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C