Information for 21-GCCAGAGCCSAGC (Motif 31)

A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
Reverse Opposite:
A T C G A G T C A G C T A T G C A C T G C T A G A G T C A G C T G A T C C G A T A C T G C T A G T G A C
p-value:1e-7
log p-value:-1.837e+01
Information Content per bp:1.705
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.0 +/- 26.7bp
Average Position of motif in Background46.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGCCSAGC
ATGCCAGACN-----
 A C G T A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGCCSAGC
TGCCAA--------
 A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGCCSAGC
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGAGCCSAGC
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCCAGAGCCSAGC
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCAGAGCCSAGC
GCCACACCCA---
 A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCAGAGCCSAGC
GAGSCCGAGC-----
 A C G T A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGCCSAGC
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCAGAGCCSAGC
----CAGCC----
 A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGCCSAGC
GGCCACACCCAN--
 A C G T A C T G A G T C A G T C C G T A C T A G C T G A T A C G G A T C T G A C T A C G C T G A T C A G T A G C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T