Information for 18-CCTTTWTTATTAT (Motif 29)

A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T
Reverse Opposite:
G T C A A C G T C G T A T C G A C G A T G T C A C G T A C G T A C G T A C T G A C G T A A T C G T A C G
p-value:1e-8
log p-value:-1.871e+01
Information Content per bp:1.774
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif250.0
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets62.8 +/- 24.7bp
Average Position of motif in Background51.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCTTTWTTATTAT-
TCTTTANTAATANN
 A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTTTWTTATTAT--
-NNTTTTTCTTATNT
 A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTWTTATTAT-
NTNTTGTTGTTTGTN
 A C G T A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTWTTATTAT-
NCNTTTGTTATTTNN
 A C G T A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTWTTATTAT
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTWTTATTAT
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTTTWTTATTAT
CCTTTGTTTT---
 A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTWTTATTAT--
NNNNTTTTTTTTTNAAC
 A C G T A C G T A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTTTWTTATTAT-
--TCTATTTTTAGA
 A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T
A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

PB0069.1_Sox21_1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTTTWTTATTAT----
-NNTAATTATAATNANN
 A G T C A T G C A C G T A G C T A C G T C G A T A C G T C A G T G C T A A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A