Information for 21-RTTGCTGGCAAATATT (Motif 28)

C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
Reverse Opposite:
G T C A C T G A C G A T C T G A A C G T A C G T A C G T C T A G G A T C G T A C C T G A C A T G G T A C C G T A T G C A G A T C
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.752
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 27.5bp
Average Position of motif in Background40.0 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RTTGCTGGCAAATATT
-CTTCTGGGAAA----
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.61
Offset:8
Orientation:forward strand
Alignment:RTTGCTGGCAAATATT------
--------CTAATATTGCTAAA
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.61
Offset:8
Orientation:forward strand
Alignment:RTTGCTGGCAAATATT------
--------CTAATATTGCTAAA
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXD2/MA0847.1/Jaspar

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:RTTGCTGGCAAATATT
-------GTAAACA--
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RTTGCTGGCAAATATT
--TTCTTGGAAAN---
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RTTGCTGGCAAATATT
-TTTCCAGGAAA----
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RTTGCTGGCAAATATT
NATTTCCNGGAAAT---
 A C G T C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RTTGCTGGCAAATATT
-TTTCCAGGAAATGG-
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RTTGCTGGCAAATATT
---NATGGAAAAN---
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:RTTGCTGGCAAATATT
-----TGGAAAA----
 C T A G A C G T A C G T A C T G G T A C A G C T A C T G C T A G G A T C C G T A C G T A C G T A A G C T C G T A G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T