Information for 15-ACATAWCWWWTTG (Motif 24)

C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A C G T A C G A T C G T A A C T G C G A T A C G T C G T A A C G T A C T G A C G T
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.8 +/- 26.2bp
Average Position of motif in Background45.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACATAWCWWWTTG
ACCCGTATCAAATTT
 A C G T A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ACATAWCWWWTTG
GACAGAGATATCAGTGT-
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACATAWCWWWTTG
AAGATATCCTT---
 A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACATAWCWWWTTG-----
-CAAAGCTAATTAGNTTN
 C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACATAWCWWWTTG-
ACCGTGACTAATTNN
 A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ACATAWCWWWTTG
ANGTTACATAA-------
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACATAWCWWWTTG
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACATAWCWWWTTG
TATTACGTAACA-----
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACATAWCWWWTTG
AAAAATAACAAACGG
 A C G T A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACATAWCWWWTTG
NNCNNAACAATTNT
 A C G T C G T A G T A C C G T A A C G T C G T A C G T A G T A C C G A T C G T A C G A T A C G T A C G T A T C G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T