p-value: | 1e-10 |
log p-value: | -2.391e+01 |
Information Content per bp: | 1.849 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.25% |
Number of Background Sequences with motif | 19.4 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 41.8 +/- 29.7bp |
Average Position of motif in Background | 55.2 +/- 25.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MF0010.1_Homeobox_class/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGAATTCVTAAA AATAATT------ |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGAATTCVTAAA ATAAACAATTAAACA- |
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PB0165.1_Sox11_2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGAATTCVTAAA NNCNNAACAATTNT---- |
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PB0175.1_Sox4_2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGAATTCVTAAA TNCNNAACAATTTTTNC- |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGAATTCVTAAA TNNAGAACAATANATNN- |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGAATTCVTAAA- TGAAGGGATTAATCATC |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGAATTCVTAAA---- -TAAAGTCGTAAAACAT |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAGAATTCVTAAA-- ----AGTCGTAAAAA |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AAGAATTCVTAAA NNNNNGAACAATTGANN-- |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGAATTCVTAAA---- -TAAAGTCGTAAAACGT |
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