Information for 13-CAAATATTTGAST (Motif 18)

A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T
Reverse Opposite:
C T G A A T C G C G A T G T A C C G T A C G T A C G T A A C G T C G T A A G C T A G C T C G A T A C T G
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 28.7bp
Average Position of motif in Background60.7 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAATATTTGAST-
CTAATATTGCTAAA
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAATATTTGAST-
CTAATATTGCTAAA
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAAATATTTGAST-
-----ATTTGAATT
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAAATATTTGAST
-AATTATT-----
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAAATATTTGAST-
----TAATTGATTA
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAATATTTGAST
-GAATGTTTGTTT
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAAATATTTGAST--
-----ATTTGCATAT
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAAATATTTGAST-
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAAATATTTGAST-
----TRTTTACTTW
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAAATATTTGAST--
-----ATTTGCATAA
 A G T C C G T A C T G A C T G A A C G T C G T A A C G T A C G T A C G T A C T G C G T A T A G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A