Information for 10-AGKACCAAGTATG (Motif 15)

C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G
Reverse Opposite:
G T A C G T C A A C G T G T C A A G T C C A G T C A G T A C T G C T A G A C G T T G C A G A T C A G C T
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.672
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif153.3
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets39.9 +/- 26.3bp
Average Position of motif in Background50.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGKACCAAGTATG---
GAAGACCAATTAGCGCT
 A C G T C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGKACCAAGTATG--
AACAACCAATTAATTC
 A C G T C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGKACCAAGTATG--
AAAAACCAATTAAGAA
 A C G T C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Nobox/MA0125.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGKACCAAGTATG
---ACCAATTA--
 C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G
A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGKACCAAGTATG-----
GAAGTANCACGAATNMRAGT
 A C G T A C G T C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGKACCAAGTATG
----CCAATTAA-
 C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGKACCAAGTATG--
CAAAACCAATTAATTT
 A C G T C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGKACCAAGTATG---
--TNCCATATATGGNA
 C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGKACCAAGTATG-
NNNTAACAATTATAN
 A C G T C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGKACCAAGTATG-
--TNCCATATATGG
 C T G A C A T G A C G T C G T A G A T C T A G C G T C A G T C A A C T G A C G T G T C A A C G T A C T G A C G T
A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G