Information for 18-ACGTGTGCYT (Motif 43)

C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G A G T C C G T A A T G C C G T A A G T C A C T G C G A T
p-value:1e-6
log p-value:-1.535e+01
Information Content per bp:1.887
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif25.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets32.9 +/- 20.9bp
Average Position of motif in Background46.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGTGCYT--
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACGTGTGCYT---
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACGTGTGCYT--
--CTGTTCCTGG
 C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGTGCYT--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACGTGTGCYT
NNCGCGTGNN-
 A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGTGTGCYT
GCACGTGT----
 A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACGTGTGCYT
GGCACGTGTC---
 A C G T A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGTGTGCYT
CACGTG-----
 A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGTGTGCYT
GGACGTGC----
 A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGTGCYT-
GCACGTGTCNNNN
 A C G T A C G T C G T A G T A C A C T G A C G T A T C G A C G T A C T G A G T C A G T C A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A