Information for 5-TGTTDWACTTGGC (Motif 9)

A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C G T A C C G T A C G T A T C A G C G A T G C T A G T C A G T C A C T G A A G T C C G T A
p-value:1e-13
log p-value:-3.180e+01
Information Content per bp:1.749
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.9 +/- 25.6bp
Average Position of motif in Background46.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TGTTDWACTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.69
Offset:8
Orientation:forward strand
Alignment:TGTTDWACTTGGC-
--------TTGGCA
 A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:TGTTDWACTTGGC---
-------NTTGGCANN
 A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TGTTDWACTTGGC---
------NNTTGGCANN
 A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TGTTDWACTTGGC--
-------CTTGGCAA
 A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTTDWACTTGGC
NNNTGTTGTTGTTNG-
 A C G T A C G T A C G T A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTTDWACTTGGC
TGTTTACTTAGG-
 A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTTDWACTTGGC
NTTGTTTACGTTNN-
 A C G T A C G T A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGTTDWACTTGGC
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGTTDWACTTGGC
CTTTGTTTACTTTTN-
 A C G T A C G T A C G T A C G T C T A G A G C T A C G T C A G T C G A T G C T A A G T C A C G T A C G T A C T G A C T G G T A C
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T