Information for 4-TTTATGAGCACAT (Motif 8)

G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
Reverse Opposite:
G T C A A C G T A T C G G C A T T A C G A G T C C G A T A T G C C G T A A C G T C T G A G T C A C G T A
p-value:1e-15
log p-value:-3.517e+01
Information Content per bp:1.766
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets58.4 +/- 19.4bp
Average Position of motif in Background53.2 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGAGCACAT---
NTNTATGTGCACATNNN
 A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGAGCACAT---
NNGTATGTGCACATNNN
 A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TTTATGAGCACAT--
-TTATTAGTACATAN
 G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T A C G T A C G T
A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGAGCACAT
NAATTTTACGAGNTNN-
 A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTATGAGCACAT
TTTTATKRGG----
 A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGAGCACAT
ANATTTTACGAGNNNN-
 A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGAGCACAT
NTTTTACGAGN----
 A C G T A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGAGCACAT
TTTTATTRGN----
 A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGAGCACAT
NTTTTATTGG-----
 A C G T A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGAGCACAT
DGWTTTATGRCN----
 A C G T A C G T A C G T G A C T C A G T A G C T C G T A A C G T T A C G C G T A C T A G A G T C C G T A A T G C G T C A C A G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T