Information for 2-ARGWACACDGTGTWCY (Motif 2)

C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
Reverse Opposite:
C T G A C A T G C G A T C G T A A G T C G C T A T A G C G C T A T A C G C G A T A C T G G C A T G C A T G A T C G A C T A G C T
p-value:1e-168
log p-value:-3.888e+02
Information Content per bp:1.587
Number of Target Sequences with motif167.0
Percentage of Target Sequences with motif22.91%
Number of Background Sequences with motif437.5
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets54.1 +/- 19.2bp
Average Position of motif in Background52.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:ARGWACACDGTGTWCY
NAGAACAGNCTGTNCT
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:ARGWACACDGTGTWCY
NAGNACANNNTGTNCT
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

NR3C1/MA0113.3/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:ARGWACACDGTGTWCY-
GGGTACATAATGTTCCC
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:ARGWACACDGTGTWCY-
GGGAACATTGTGTTCCC
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:ARGWACACDGTGTWCY-
GGGAACACGGTGTACCC
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:forward strand
Alignment:ARGWACACDGTGTWCY
VAGRACAKWCTGTYC-
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:ARGWACACDGTGTWCY
AAGAACATWHTGTTC-
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:ARGWACACDGTGTWCY
VAGRACAKNCTGTBC-
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ARGWACACDGTGTWCY
CCAGGAACAG--------
 A C G T A C G T C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ARGWACACDGTGTWCY-
-TGAACTCNATGAACTC
 C T G A C T G A C T A G C G T A C G T A A G T C G C T A A T G C C G A T A T C G C G A T A C T G G C A T G C T A G A T C G A C T A C G T
A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C