Information for 10-TGGCATCTAAYMC (Motif 11)

A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
Reverse Opposite:
A C T G A C G T C T G A A C G T G C A T C G T A C T A G C G T A A C G T A C T G A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 30.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATCTAAYMC
GGTTGGCAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATCTAAYMC
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATCTAAYMC
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCATCTAAYMC
TTGGCA--------
 A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGGCATCTAAYMC
NGTAGGTTGGCATNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCATCTAAYMC
TGTCANYT-----
 A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGCATCTAAYMC----
-GNNAGCTAATCCCCCN
 A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATCTAAYMC
NGTGGGCAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGCATCTAAYMC
AGGTCTCTAACC-
 A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATCTAAYMC
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A C G T A G A C T G T C A A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T