Information for 8-CACASAGGAGGCA (Motif 8)

A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A G T C A G T C A C G T A T C G A C G T A C T G A C G T A C T G
p-value:1e-14
log p-value:-3.275e+01
Information Content per bp:1.920
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 15.7bp
Average Position of motif in Background66.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACASAGGAGGCA-
CCACACAGCAGGAGA
 A C G T A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACASAGGAGGCA
--AACAGGAAGT-
 A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACASAGGAGGCA-
CCACACAGCAGGAGA
 A C G T A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACASAGGAGGCA-
GAGCACAGCAGGACA
 A C G T A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACASAGGAGGCA
AACAAAGG-----
 A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACASAGGAGGCA-
--CACAGCAGGGGG
 A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACASAGGAGGCA
-ACAAAGGNBCCT
 A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CACASAGGAGGCA
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACASAGGAGGCA----
NTNNNAGGAGTCTCNTN
 A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CACASAGGAGGCA----
-----AGGAAACAGCTG
 A G T C C G T A A G T C C G T A A T G C C G T A A C T G A C T G C G T A A C T G C T A G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G