Information for 11-CAGGCWCTTCGKGAGC (Motif 20)

A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
Reverse Opposite:
A C T G T G A C C G A T A G T C G T C A A T G C T A C G C G T A T G C A A C T G C G A T A C T G G T A C A G T C A C G T A T C G
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.772
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 19.7bp
Average Position of motif in Background36.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCWCTTCGKGAGC
CACAGN------------
 A C G T A C G T A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCWCTTCGKGAGC
ANCAGGATGT--------
 A C G T A C G T A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGGCWCTTCGKGAGC
--NCCACTTCCGG---
 A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCWCTTCGKGAGC---
YCAGGCWCAGTACCAGGCTC
 A C G T A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGGCWCTTCGKGAGC
AAGGCAAGTGT-----
 A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAGGCWCTTCGKGAGC--
-GGGAACACGGTGTACCC
 A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C A C G T A C G T
A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:CAGGCWCTTCGKGAGC
----------CGGAGC
 A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CAGGCWCTTCGKGAGC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CAGGCWCTTCGKGAGC
----CACTTCCTGT--
 A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCWCTTCGKGAGC---
TCAGCACCATGGACAGCTCC
 A C G T A T G C C G T A A C T G A C T G G T A C C G T A A G T C A C G T A C G T A T G C A T C G C A G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C