Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-142 | -3.282e+02 | 0.0000 | 302.0 | 40.98% | 3313.9 | 7.30% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-132 | -3.046e+02 | 0.0000 | 291.0 | 39.48% | 3313.9 | 7.30% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-131 | -3.025e+02 | 0.0000 | 318.0 | 43.15% | 4121.6 | 9.07% | motif file (matrix) |
svg |
4 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-116 | -2.687e+02 | 0.0000 | 103.0 | 13.98% | 196.4 | 0.43% | motif file (matrix) |
svg |
5 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-89 | -2.058e+02 | 0.0000 | 215.0 | 29.17% | 2577.4 | 5.67% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-84 | -1.936e+02 | 0.0000 | 223.0 | 30.26% | 2984.8 | 6.57% | motif file (matrix) |
svg |
7 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-80 | -1.853e+02 | 0.0000 | 107.0 | 14.52% | 510.8 | 1.12% | motif file (matrix) |
svg |
8 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-68 | -1.574e+02 | 0.0000 | 122.0 | 16.55% | 948.2 | 2.09% | motif file (matrix) |
svg |
9 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-67 | -1.554e+02 | 0.0000 | 94.0 | 12.75% | 485.9 | 1.07% | motif file (matrix) |
svg |
10 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-65 | -1.516e+02 | 0.0000 | 75.0 | 10.18% | 261.0 | 0.57% | motif file (matrix) |
svg |
11 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-63 | -1.466e+02 | 0.0000 | 263.0 | 35.69% | 5306.7 | 11.68% | motif file (matrix) |
svg |
12 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-60 | -1.394e+02 | 0.0000 | 100.0 | 13.57% | 686.1 | 1.51% | motif file (matrix) |
svg |
13 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-54 | -1.264e+02 | 0.0000 | 177.0 | 24.02% | 2785.4 | 6.13% | motif file (matrix) |
svg |
14 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-52 | -1.206e+02 | 0.0000 | 179.0 | 24.29% | 2968.7 | 6.54% | motif file (matrix) |
svg |
15 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-46 | -1.060e+02 | 0.0000 | 186.0 | 25.24% | 3543.0 | 7.80% | motif file (matrix) |
svg |
16 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-44 | -1.023e+02 | 0.0000 | 157.0 | 21.30% | 2651.6 | 5.84% | motif file (matrix) |
svg |
17 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-40 | -9.216e+01 | 0.0000 | 112.0 | 15.20% | 1496.4 | 3.29% | motif file (matrix) |
svg |
18 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-26 | -6.002e+01 | 0.0000 | 201.0 | 27.27% | 5706.0 | 12.56% | motif file (matrix) |
svg |
19 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-25 | -5.773e+01 | 0.0000 | 107.0 | 14.52% | 2061.3 | 4.54% | motif file (matrix) |
svg |
20 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-23 | -5.313e+01 | 0.0000 | 128.0 | 17.37% | 2962.4 | 6.52% | motif file (matrix) |
svg |
21 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.420e+01 | 0.0000 | 258.0 | 35.01% | 9325.5 | 20.53% | motif file (matrix) |
svg |
22 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.379e+01 | 0.0000 | 27.0 | 3.66% | 147.5 | 0.32% | motif file (matrix) |
svg |
23 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-16 | -3.785e+01 | 0.0000 | 115.0 | 15.60% | 3031.7 | 6.67% | motif file (matrix) |
svg |
24 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-15 | -3.612e+01 | 0.0000 | 136.0 | 18.45% | 4001.4 | 8.81% | motif file (matrix) |
svg |
25 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-14 | -3.297e+01 | 0.0000 | 93.0 | 12.62% | 2348.0 | 5.17% | motif file (matrix) |
svg |
26 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-13 | -3.015e+01 | 0.0000 | 72.0 | 9.77% | 1647.6 | 3.63% | motif file (matrix) |
svg |
27 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-12 | -2.884e+01 | 0.0000 | 76.0 | 10.31% | 1846.8 | 4.07% | motif file (matrix) |
svg |
28 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.607e+01 | 0.0000 | 24.0 | 3.26% | 242.0 | 0.53% | motif file (matrix) |
svg |
29 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.552e+01 | 0.0000 | 32.0 | 4.34% | 448.7 | 0.99% | motif file (matrix) |
svg |
30 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.507e+01 | 0.0000 | 119.0 | 16.15% | 3857.9 | 8.49% | motif file (matrix) |
svg |
31 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.482e+01 | 0.0000 | 56.0 | 7.60% | 1241.6 | 2.73% | motif file (matrix) |
svg |
32 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-9 | -2.286e+01 | 0.0000 | 41.0 | 5.56% | 779.1 | 1.72% | motif file (matrix) |
svg |
33 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-9 | -2.151e+01 | 0.0000 | 77.0 | 10.45% | 2205.6 | 4.86% | motif file (matrix) |
svg |
34 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.145e+01 | 0.0000 | 58.0 | 7.87% | 1438.4 | 3.17% | motif file (matrix) |
svg |
35 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-8 | -1.907e+01 | 0.0000 | 79.0 | 10.72% | 2421.5 | 5.33% | motif file (matrix) |
svg |
36 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.635e+01 | 0.0000 | 15.0 | 2.04% | 157.1 | 0.35% | motif file (matrix) |
svg |
37 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-6 | -1.530e+01 | 0.0000 | 28.0 | 3.80% | 553.6 | 1.22% | motif file (matrix) |
svg |
38 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.139e+01 | 0.0001 | 57.0 | 7.73% | 1911.9 | 4.21% | motif file (matrix) |
svg |
39 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -1.110e+01 | 0.0001 | 50.0 | 6.78% | 1614.1 | 3.55% | motif file (matrix) |
svg |
40 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-4 | -1.055e+01 | 0.0002 | 118.0 | 16.01% | 5007.4 | 11.02% | motif file (matrix) |
svg |
41 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -1.012e+01 | 0.0004 | 106.0 | 14.38% | 4432.5 | 9.76% | motif file (matrix) |
svg |
42 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.969e+00 | 0.0004 | 16.0 | 2.17% | 300.3 | 0.66% | motif file (matrix) |
svg |
43 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -9.954e+00 | 0.0004 | 61.0 | 8.28% | 2203.1 | 4.85% | motif file (matrix) |
svg |
44 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.573e+00 | 0.0016 | 19.0 | 2.58% | 448.5 | 0.99% | motif file (matrix) |
svg |
45 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -8.509e+00 | 0.0016 | 74.0 | 10.04% | 2970.9 | 6.54% | motif file (matrix) |
svg |
46 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.178e+00 | 0.0022 | 61.0 | 8.28% | 2355.4 | 5.19% | motif file (matrix) |
svg |
47 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.107e+00 | 0.0023 | 54.0 | 7.33% | 2020.6 | 4.45% | motif file (matrix) |
svg |
48 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.622e+00 | 0.0037 | 25.0 | 3.39% | 728.1 | 1.60% | motif file (matrix) |
svg |
49 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-3 | -7.524e+00 | 0.0040 | 35.0 | 4.75% | 1172.4 | 2.58% | motif file (matrix) |
svg |
50 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.446e+00 | 0.0042 | 8.0 | 1.09% | 112.8 | 0.25% | motif file (matrix) |
svg |
51 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -7.418e+00 | 0.0043 | 113.0 | 15.33% | 5145.1 | 11.33% | motif file (matrix) |
svg |
52 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-3 | -7.313e+00 | 0.0047 | 106.0 | 14.38% | 4783.4 | 10.53% | motif file (matrix) |
svg |
53 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.066e+00 | 0.0059 | 44.0 | 5.97% | 1627.6 | 3.58% | motif file (matrix) |
svg |
54 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -6.997e+00 | 0.0062 | 39.0 | 5.29% | 1395.5 | 3.07% | motif file (matrix) |
svg |
55 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.530e+00 | 0.0097 | 40.0 | 5.43% | 1480.2 | 3.26% | motif file (matrix) |
svg |
56 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-2 | -6.467e+00 | 0.0101 | 78.0 | 10.58% | 3409.4 | 7.51% | motif file (matrix) |
svg |
57 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-2 | -6.418e+00 | 0.0104 | 21.0 | 2.85% | 622.6 | 1.37% | motif file (matrix) |
svg |
58 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -6.349e+00 | 0.0110 | 34.0 | 4.61% | 1211.0 | 2.67% | motif file (matrix) |
svg |
59 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.216e+00 | 0.0123 | 27.0 | 3.66% | 897.1 | 1.98% | motif file (matrix) |
svg |
60 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.065e+00 | 0.0141 | 27.0 | 3.66% | 907.5 | 2.00% | motif file (matrix) |
svg |
61 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.945e+00 | 0.0156 | 39.0 | 5.29% | 1482.4 | 3.26% | motif file (matrix) |
svg |
62 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.772e+00 | 0.0183 | 6.0 | 0.81% | 86.1 | 0.19% | motif file (matrix) |
svg |
63 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -5.643e+00 | 0.0205 | 36.0 | 4.88% | 1363.7 | 3.00% | motif file (matrix) |
svg |
64 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.318e+00 | 0.0279 | 39.0 | 5.29% | 1540.6 | 3.39% | motif file (matrix) |
svg |
65 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -5.122e+00 | 0.0334 | 14.0 | 1.90% | 394.7 | 0.87% | motif file (matrix) |
svg |
66 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -5.017e+00 | 0.0365 | 35.0 | 4.75% | 1371.9 | 3.02% | motif file (matrix) |
svg |
67 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -4.843e+00 | 0.0428 | 30.0 | 4.07% | 1142.9 | 2.52% | motif file (matrix) |
svg |
68 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-2 | -4.812e+00 | 0.0435 | 27.0 | 3.66% | 1000.5 | 2.20% | motif file (matrix) |
svg |
69 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.724e+00 | 0.0468 | 33.0 | 4.48% | 1300.9 | 2.86% | motif file (matrix) |
svg |
70 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -4.635e+00 | 0.0505 | 52.0 | 7.06% | 2281.7 | 5.02% | motif file (matrix) |
svg |