Information for 5-TCCTGCCAGG (Motif 6)

A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G
Reverse Opposite:
A T G C A G T C C G A T A C T G A T C G A T G C C G T A T C A G T C A G T G C A
p-value:1e-23
log p-value:-5.477e+01
Information Content per bp:1.734
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif18.05%
Number of Background Sequences with motif3097.3
Percentage of Background Sequences with motif6.82%
Average Position of motif in Targets48.7 +/- 25.0bp
Average Position of motif in Background49.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.88
Offset:2
Orientation:forward strand
Alignment:TCCTGCCAGG
--TTGCCAAG
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TCCTGCCAGG
-CGTGCCAAG
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:TCCTGCCAGG
---TGCCAA-
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCCTGCCAGG-
-VBTGWCAGCB
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCCTGCCAGG-
-GGTGCCAAGT
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCCTGCCAGG-
--ATGCCAACC
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TCCTGCCAGG-
---TGTCANYT
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCCTGCCAGG
--TTGACAGC
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTGCCAGG
--YTGWCADY
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTGCCAGG-
--CTGCCCGCA
 A C G T A G T C A G T C A C G T A T C G A T G C A G T C C G T A C T A G T A C G A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A