Information for 6-TGCTCTCCCTGTCCTG (Motif 16)

A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
Reverse Opposite:
T A G C C G T A A C T G C T A G C G T A A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C T A G A G T C G T C A
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 12.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCTCTCCCTGTCCTG-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

IRF2/MA0051.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCTCTCCCTGTCCTG
GTTTTGCTTTCACTTTCC--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTCTCCCTGTCCTG
AGNACAGNCTGTTCTN
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTCTCCCTGTCCTG
AGNACANNNTGTNCTN
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCTCTCCCTGTCCTG
-GRACAGWMTGTYCTB
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCTCTCCCTGTCCTG
-ACTTTCACTTTC---
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCTCTCCCTGTCCTG
-GVACAGNMTGTYCTB
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTCTCCCTGTCCTG
-GGTCANNGTGACCTN
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TGCTCTCCCTGTCCTG--
--------CTGTTCCTGG
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCTCCCTGTCCTG
TCACTTTCACTTTCN--
 A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C G T A C A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T