Information for 17-SCTGWGCCAGRCY (Motif 15)

A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
Reverse Opposite:
C T A G A C T G A G C T A G T C A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C T G A T G C
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.7 +/- 21.8bp
Average Position of motif in Background53.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:SCTGWGCCAGRCY
---ATGCCAGACN
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SCTGWGCCAGRCY
-CTGTTCCTGG--
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:SCTGWGCCAGRCY
-AGGTGHCAGACA
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SCTGWGCCAGRCY-
-AGGTGNCAGACAG
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:SCTGWGCCAGRCY
--CGTGCCAAG--
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SCTGWGCCAGRCY
TGCTGAGTCA----
 A C G T A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--SCTGWGCCAGRCY
NTGCTGAGTCATCCN
 A C G T A C G T A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SCTGWGCCAGRCY
GCTGTG-------
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------SCTGWGCCAGRCY
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SCTGWGCCAGRCY-----
-CAAATCCAGACATCACA
 A T C G A G T C A C G T A C T G C G A T A C T G A G T C A G T C C G T A A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A