Information for 10-CTGTGGCTAG (Motif 9)

G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
Reverse Opposite:
G T A C A G C T C G T A A T C G T A G C G T A C C T G A T A G C C T G A A C T G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.708
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.03%
Number of Background Sequences with motif669.6
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets44.7 +/- 24.4bp
Average Position of motif in Background52.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGCTAG
GTCTGTGGTTT-
 A C G T A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCTAG
GCTGTGGTTT-
 A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGTGGCTAG
CTGTGGTTTN
 G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGCTAG
NNHTGTGGTTWN
 A C G T A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGCTAG
NNTGTGGTTT-
 A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCTAG
GCTGTG-----
 A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTGGCTAG--
CTGTTGCTAGGS
 G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGGCTAG
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGGCTAG
TGCCTGAGGCN--
 A C G T A C G T A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGCTAG
SCCTSAGGSCAW
 A C G T A C G T G T A C A G C T A T C G G A C T A C T G A T C G T A G C G C A T T C G A C A T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T