Information for 11-TTGTCATTAC (Motif 10)

C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C
Reverse Opposite:
A T C G C G A T C G T A C G T A A G C T C A T G C T G A G T A C C G T A C G T A
p-value:1e-10
log p-value:-2.331e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.9 +/- 12.4bp
Average Position of motif in Background41.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TTGTCATTAC---
TATTGGTAATTACCTT
 A C G T A C G T A C G T C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TTGTCATTAC-
---YCATTAMC
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTGTCATTAC-
-CCTAATTACC
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A C G T T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C

HOXB2/MA0902.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTGTCATTAC-
-AGTAATTAAC
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C

PDX1/MA0132.2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTGTCATTAC
--GTAATTAG
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C
A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGTCATTAC-
-GGTAATTAGC
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGTCATTAC-
-ACTAATTAGC
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCATTAC-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

MEOX2/MA0706.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGTCATTAC-
-AGTAATTAAC
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTGTCATTAC
--CTAATTAA
 C G A T A C G T A C T G A G C T G T A C C T G A A C G T C G A T C G T A A T G C
A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A